Amen to that. It's ridiculous that we've grown these agro-businesses and huge food corporation producing food en masse, therefore requiring strict regulations, and now force small farmers to follow those regulations - which for the most part make no sense to their format of production. It is killing small farmers and small producers. I know the cost of compliance alone has discouraged many of the smaller farmers in Europe.
This seems like a move in the right direction to me.
In some respects it's worse than you're stating.
Two strong examples: salmonella in poultry and TB in milk. When I first heard about people wanting "raw milk," I was shocked, because universal pasteurization has been one of the few great public health successes of the USDA. But it turns out that's not precisely true: actually, roughly 100 years ago, there were two major proposals to deal with TB in milk. One proposal insisted on hygienic practices, and the other on pasteurization. The hygienic practices proposal was shelved, for the simple reason that it would be relatively expensive for large-scale dairy farmers to abide by decent practices, and of course here in the USA, large-scale companies always win.
The same thing happened with salmonella in poultry products. Faced with the reality that the only way to prevent the spread of salmonella in such products was a quantum improvement in hygiene at poultry battery farms, the USDA ruled that salmonella just happens automatically in chickens and there's nothing you can do about it. They know that this is not in fact true, but the choices are simple: either require battery farms to have decent practices, or lie.
Of course, these hygienic practices are a great deal easier when you don't have that many chickens or cows, and you don't raise them in boxes of their own excretions. So if you brought in serious hygiene requirements, this would be a boon for the small farmers and a blow to the big ones.
As to this ruling: it really depends how the first outbreaks get reported, by the media and the government. (Not to say that either is monolithic.) If the public is given the impression that the outbreaks are (a) unusual, and (b) the result of allowing small farms to raise animals decently, then this will be yet another move toward the destruction of our food supply. Of course, to report otherwise, you'd have to contextualize: you'd have to report that, yes, there's been an outbreak, but in fact this is statistically a lot less bad than underreported outbreaks at large container farms. That's not an easy story to soundbite, so the media types won't like it, and it's better for small businesses than large ones, so the government outlets won't like it.
Result? I hope these small farms are really, really scrupulous about hygienic practices, or this is going to be just another blow to the US food stream.